PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096626.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 190aa    MW: 20956.9 Da    PI: 9.8559
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096626.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00164769123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_010096626.1 47 FECKTCNRQFPSFQALGGHRASH 69
                    89**********99999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.21E-845118No hitNo description
PfamPF139123.2E-134671IPR007087Zinc finger, C2H2
SMARTSM003550.164769IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8274774IPR007087Zinc finger, C2H2
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
PfamPF139129.6E-1095120IPR007087Zinc finger, C2H2
SMARTSM003550.5496118IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.14196123IPR007087Zinc finger, C2H2
PROSITE patternPS00028098118IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MKRSITDRDH MENLTMANCL MFLSRGDHHH QFEYSSPSPS SSPSRVFECK TCNRQFPSFQ  60
ALGGHRASHK KPRVMTGDGG SSSDSQGGSP AKPKTHECTI CGLEFAIGQA LGGHMRRHRA  120
AMTEVNQAQH VVRPHHHPAL IMNSATTLQQ VPVLKKTNSS RRVLCLDLNL TPLENDIKIL  180
QLGTTVQLIG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096626.11e-141Zinc finger protein ZAT11
TrEMBLW9RAF71e-141W9RAF7_9R
STRINGPOPTR_0010s21650.11e-66(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.16e-39C2H2 family protein